571c71e6f7
We are migrating packages that meet below requirements:
1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration
The tool is here: https://github.com/Aleksanaa/by-name-migrate.
31 lines
791 B
Nix
31 lines
791 B
Nix
{lib, stdenv, fetchFromGitHub, cmake, zlib, ncurses}:
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stdenv.mkDerivation rec {
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pname = "somatic-sniper";
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version = "1.0.5.0";
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src = fetchFromGitHub {
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owner = "genome";
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repo = "somatic-sniper";
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rev = "v${version}";
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sha256 = "0lk7p9sp6mp50f6w1nppqhr40fcwy1asw06ivw8w8jvvnwaqf987";
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};
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patches = [ ./somatic-sniper.patch ];
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nativeBuildInputs = [ cmake ];
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buildInputs = [ zlib ncurses ];
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enableParallelBuilding = false;
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meta = with lib; {
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description = "Identify single nucleotide positions that are different between tumor and normal";
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mainProgram = "bam-somaticsniper";
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license = licenses.mit;
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homepage = "https://github.com/genome/somatic-sniper";
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maintainers = with maintainers; [ jbedo ];
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platforms = platforms.linux;
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};
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}
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