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7616 Commits

Author SHA1 Message Date
Weijia Wang
419d7f9c8d
Merge pull request #230753 from fetsorn/typos 
several typos
 2023-05-09 19:16:12 +03:00
fetsorn
f14fbf0278 siesta: fix typos 
"manualy" -> "manually"
"becuase" -> "because"
 2023-05-09 18:02:16 +04:00
Weijia Wang
32c81c727a
Merge pull request #230831 from wegank/root-python 
python311Packages.hepmc3: fix build
 2023-05-09 12:12:10 +03:00
Weijia Wang
d63d6cb660 python311Packages.hepmc3: fix build 2023-05-09 11:28:25 +03:00
Sandro
05b1a97381
Merge pull request #179752 from hqurve/cantor 
init labplot, cantor and supporting libraries
 2023-05-08 21:28:08 +02:00
markuskowa
2b54d8d84b
Merge pull request #230671 from markuskowa/upd-nwchem 
nwchem: 7.0.2 -> 7.2.0
 2023-05-08 17:03:50 +02:00
hqurve
842704c7cf
labplot: init at 2.10.0 2023-05-08 14:40:27 +02:00
hqurve
547071ee63
sage: expose sage-with-env 2023-05-08 14:40:26 +02:00
Markus Kowalewski
d6b6fd9544
nwchem: enable new features (dftd3, libxc, plumed) 2023-05-08 14:24:07 +02:00
Renato Garcia
9d1a27e2fd
snakemake: 7.14.2 -> 7.25.3 (#230524) 2023-05-08 02:05:40 -04:00
Sandro
33f9eb206e
Merge pull request #223411 from apraga/kent-with-include 
Kent: add headers to the package
 2023-05-07 16:29:16 +02:00
Weijia Wang
9b3763d117
Merge pull request #230393 from r-ryantm/auto-update/_4ti2 
_4ti2: 1.6.9 -> 1.6.10
 2023-05-07 10:44:33 +03:00
Robert Scott
8f4308a432
Merge pull request #229364 from jleightcap/jl/verilog-12.0 
verilog: 11.0 -> 12.0
 2023-05-06 21:47:30 +01:00
R. Ryantm
b9216e3e4f _4ti2: 1.6.9 -> 1.6.10 2023-05-06 20:43:07 +00:00
Weijia Wang
589e345207
Merge pull request #230330 from r-ryantm/auto-update/gnuastro 
gnuastro: 0.19 -> 0.20
 2023-05-06 21:01:30 +03:00
Alexis Praga
e027a5d836 kent: package headers too. 
This is needed for perlPackages.BioBigFile.
Removing NIX_BUILD_TOP.
 2023-05-06 19:48:14 +02:00
Jack Leightcap
4fdd191d65
verilog-12.0: installCheckPhase on supported arch 
Signed-off-by: Jack Leightcap <jack@leightcap.com>
 2023-05-06 13:06:47 -04:00
Jack Leightcap
03ad8569fd
verilog-12.0: temp disable regression test suite 
Signed-off-by: Jack Leightcap <jack@leightcap.com>
 2023-05-06 12:35:27 -04:00
Ilya
32fc1ceac6
qucs-s: 0.0.22 -> 1.0.2 (#223378) 
* qucs-s: 0.0.22->1.0.1 (including Qt4=>Qt5)

* qucs-s: Qt5->Qt6

* qucs-s: add qtwayland input as recommended for Qt6

Co-authored-by: Tungsten842 <quantmint@protonmail.com>

* qucs-s 1.0.1->1.0.2

---------

Co-authored-by: Tungsten842 <quantmint@protonmail.com>
 2023-05-06 16:28:29 +02:00
R. Ryantm
7ef62c2132 gnuastro: 0.19 -> 0.20 2023-05-06 12:26:20 +00:00
Markus Kowalewski
621e086136 nwchem: 7.0.2 -> 7.2.0 2023-05-05 12:43:59 +02:00
Weijia Wang
830fb9f17b
Merge pull request #229863 from r-ryantm/auto-update/sherpa 
sherpa: 2.2.14 -> 2.2.15
 2023-05-04 14:37:34 +03:00
R. Ryantm
48fe29f726 sherpa: 2.2.14 -> 2.2.15 2023-05-04 09:55:53 +00:00
R. Ryantm
be4b60bf4f minimap2: 2.25 -> 2.26 2023-05-03 19:38:48 +00:00
Jörg Thalheim
255c9a8b83
Merge pull request #229536 from lopsided98/mission-planner-update 
mission-planner: 1.3.76 -> 1.3.80
 2023-05-03 16:29:13 +01:00
R. Ryantm
b74708700e verilator: 5.008 -> 5.010 2023-05-03 07:37:25 -05:00
Sandro
93640c56d1
Merge pull request #227420 from GaetanLepage/torchbin-update 
python3Packages.torch-bin: 1.13.1 -> 2.0.0
 2023-05-03 09:58:56 +02:00
Weijia Wang
2992b28922
Merge pull request #229494 from bcdarwin/update-ants 
ants: 2.4.3 -> 2.4.4
 2023-05-03 00:25:01 +03:00
Ben Wolsieffer
9034073d25 mission-planner: 1.3.76 -> 1.3.80 2023-05-02 15:48:27 -04:00
Ben Darwin
cf573698b1 ants: 2.4.3 -> 2.4.4 2023-05-02 12:29:21 -04:00
Daniel Nagy
8372789e47
qgroundcontrol: 4.2.4 -> 4.2.6 
Diff: https://github.com/mavlink/qgroundcontrol/compare/v4.2.4...v4.2.6
 2023-05-02 16:45:00 +02:00
Weijia Wang
ea4289e1f9 nvc: 1.9.1 -> 1.9.2 2023-05-02 11:02:08 +03:00
Luflosi
e97667163e
verilog: 11.0 -> 12.0 
https://github.com/steveicarus/iverilog/releases/tag/v12_0

Bump `iverilog` to 12.0, fixing two build failures:

1. autoconf now picks up on the unwrapped `x86_64-unknown-gnu-gcc` in
   path that fails at configurePhase to link executables.
   See: https://github.com/NixOS/nixpkgs/issues/21751
   fix/hack: define the `{CC,CXX}_FOR_BUILD` variables.
2. buildPhase generates a `-Werror=format-security` error. Backport
   the the upstream patch that fixed the warning very shortly after the
   release was cut.

And in the process,

- use post-install tests from `.github/test.sh` and as a result,
  remove the now unneeded clone of `ivtest`
- un-pin the verilog autoconf version

Signed-off-by: Jack Leightcap <jack@leightcap.com>
 2023-05-01 17:46:06 -04:00
Weijia Wang
f2bef820c8
Merge pull request #228994 from r-ryantm/auto-update/minimap2 
minimap2: 2.24 -> 2.25
 2023-05-01 07:13:09 +03:00
R. Ryantm
6300f3bfb2 elan: 1.4.2 -> 1.4.5 2023-04-30 15:35:03 +00:00
Weijia Wang
41bfa33de5
Merge pull request #229083 from sikmir/pulseview 
pulseview: enable on darwin
 2023-04-30 14:39:16 +03:00
Nikolay Korotkiy
11b65fea77
pulseview: enable on darwin 2023-04-30 14:34:10 +04:00
Nikolay Korotkiy
5b9065da7e
pulseview: refactor 
* Remove Qt's mkDerivation in favour of stdenv.mkDerivation to fix https://github.com/NixOS/nixpkgs/issues/180841
* Move qttools to nativeBuildInputs
 2023-04-30 14:33:24 +04:00
figsoda
3dcff817ee
Merge pull request #228998 from r-ryantm/auto-update/rofi-calc 
rofi-calc: 2.1.0 -> 2.2.0
 2023-04-29 19:07:58 -04:00
R. Ryantm
168782c6c5 rofi-calc: 2.1.0 -> 2.2.0 2023-04-29 22:12:20 +00:00
R. Ryantm
54a5899734 minimap2: 2.24 -> 2.25 2023-04-29 21:45:58 +00:00
Weijia Wang
317f78618e
Merge pull request #228880 from r-ryantm/auto-update/sumo 
sumo: 1.16.0 -> 1.17.0
 2023-04-30 00:24:48 +03:00
Gaetan Lepage
608908ed7a lit: move to python-modules 2023-04-29 13:53:50 +02:00
R. Ryantm
ec75148ca2 sumo: 1.16.0 -> 1.17.0 2023-04-29 09:39:15 +00:00
R. Ryantm
395db2896e bedtools: 2.30.0 -> 2.31.0 2023-04-29 03:05:55 +00:00
Weijia Wang
8fcab98a40
Merge pull request #228633 from NixOS/revert-226351-pr/root7 
Revert "root: enable root7"
 2023-04-28 22:56:05 +03:00
Austin Seipp
5e871533c4 verilator: 5.006 -> 5.008 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2023-04-28 04:40:45 -05:00
Austin Seipp
6a086197c2 verilator: wrap with glibc LOCALE_ARCHIVE iff stdenv.isLinux 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2023-04-28 04:40:45 -05:00
Dmitry Kalinkin
9092b9b5df Revert "root: enable root7 (#226351)" 
This reverts commit cafa2f02fb.
 2023-04-27 22:23:56 -04:00
Dmitry Kalinkin
af661f3be7
Revert "root: fix build on aarch64-darwin" 2023-04-27 18:36:02 -04:00