OTABI Tomoya
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9b586ea68f
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Merge pull request #243431 from natsukium/kssd/update
kssd: 1.1 -> 2.21; enable aarch64-linux support
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2023-11-03 20:15:48 +09:00 |
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natsukium
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10c3a40621
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kssd: enable aarch64-linux support & tests
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2023-11-03 19:34:28 +09:00 |
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natsukium
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847c506eae
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kssd: refactor
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2023-11-03 19:34:28 +09:00 |
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natsukium
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fdc1ddd305
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kssd: 1.1 -> 2.21
Diff: https://github.com/yhg926/public_kssd/compare/v1.1...v2.21
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2023-11-03 19:34:28 +09:00 |
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R. Ryantm
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454e029519
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mmseqs2: 14-7e284 -> 15-6f452
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2023-11-01 09:19:34 +00:00 |
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Guillaume Girol
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97da6c943d
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Merge pull request #262311 from scalavision/update-deeptools
deeptools: 3.5.1 -> 3.5.4
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2023-10-28 16:51:14 +02:00 |
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OTABI Tomoya
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ae84a36b66
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Merge pull request #262697 from natsukium/dssp/update
dssp: 4.4.3 -> 4.4.4.1; libcifpp: 5.2.1 -> 5.2.2
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2023-10-28 12:20:29 +09:00 |
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Weijia Wang
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90e0e54124
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Merge pull request #261508 from r-ryantm/auto-update/raxml
raxml: 8.2.12 -> 8.2.13
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2023-10-28 03:30:42 +02:00 |
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R. Ryantm
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bda407e1c8
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delly: 1.1.7 -> 1.1.8
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2023-10-25 10:07:12 +00:00 |
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natsukium
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30e00f04e3
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dssp: 4.4.3 -> 4.4.4.1
Diff: https://github.com/PDB-REDO/dssp/compare/refs/tags/v4.4.3...v4.4.4.1
Changelog: https://github.com/PDB-REDO/libcifpp/releases/tag/refs/tags/v4.4.4.1
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2023-10-22 18:22:11 +09:00 |
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OTABI Tomoya
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0686263a23
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Merge pull request #227090 from natsukium/bowtie2/aarch64
bowtie2: fix build on aarch64
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2023-10-21 10:29:31 +09:00 |
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Dmitry Kalinkin
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6392f18258
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Merge pull request #262351 from h7x4/remove-nix-exec-bits
treewide: remove execute bit for non-executable `*.nix` files
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2023-10-20 14:45:16 -04:00 |
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h7x4
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e6321d2788
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treewide: remove execute bit for non-executable *.nix files
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2023-10-20 19:55:39 +02:00 |
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OTABI Tomoya
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0a18e1f929
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Merge pull request #249750 from natsukium/bioawk/init
bioawk: init at unstable-2017-09-11
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2023-10-20 17:59:30 +09:00 |
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natsukium
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056f9e21c0
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bowtie2: enable tests
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2023-10-20 17:08:20 +09:00 |
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natsukium
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13fe1effaf
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bowtie2: fix build on aarch64
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2023-10-20 17:07:55 +09:00 |
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natsukium
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aae51697be
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bowtie2: refactor
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2023-10-20 17:06:09 +09:00 |
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scalavision
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9fd3ea0f76
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deeptools: 3.5.1 -> 3.5.4
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2023-10-18 19:06:01 +02:00 |
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R. Ryantm
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355e594816
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raxml: 8.2.12 -> 8.2.13
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2023-10-16 22:16:12 +00:00 |
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R. Ryantm
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d89c2af58a
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bowtie2: 2.5.1 -> 2.5.2
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2023-10-14 10:06:32 +00:00 |
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OTABI Tomoya
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e8f331680d
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Merge pull request #259418 from natsukium/blast-bin/update
blast-bin: 2.13.0 -> 2.14.1
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2023-10-12 23:49:59 +09:00 |
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natsukium
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d60c85fb75
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blast-bin: add sourceProvenance to meta
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2023-10-07 10:12:24 +09:00 |
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natsukium
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3dc0f1e7b7
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blast-bin: 2.13.0 -> 2.14.1
Changelog: https://www.ncbi.nlm.nih.gov/books/NBK131777/#_Blast_ReleaseNotes_BLAST_2_14_1_August_2_
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2023-10-07 01:59:18 +09:00 |
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natsukium
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96178c29a4
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truvari: 4.0.0 -> 4.1.0
Diff: https://github.com/ACEnglish/truvari/compare/v4.0.0...v4.1.0
Changelog: https://github.com/ACEnglish/truvari/releases/tag/v4.1.0
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2023-10-07 01:30:27 +09:00 |
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natsukium
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776b2694a3
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truvari: add meta.changelog
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2023-10-07 01:30:27 +09:00 |
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Justin Bedo
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e347cca9f8
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delly: 1.1.6 -> 1.1.7
Diff: https://github.com/dellytools/delly/compare/v1.1.6...1.1.7
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2023-10-06 14:12:05 +11:00 |
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Weijia Wang
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0396d3b0fb
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Merge pull request #258254 from r-ryantm/auto-update/nest-mpi
nest-mpi: 3.5 -> 3.6
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2023-10-01 03:53:05 +02:00 |
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Weijia Wang
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d2f79d7443
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Merge pull request #257369 from r-ryantm/auto-update/stacks
stacks: 2.62 -> 2.65
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2023-10-01 03:20:19 +02:00 |
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Weijia Wang
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293062bbdb
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stacks: set platforms
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2023-10-01 02:26:34 +02:00 |
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Weijia Wang
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00d57438ab
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Merge pull request #256805 from r-ryantm/auto-update/neuron-mpi
neuron-mpi: 8.2.2 -> 8.2.3
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2023-10-01 00:44:58 +02:00 |
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R. Ryantm
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a78f4ed541
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nest-mpi: 3.5 -> 3.6
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2023-09-30 18:54:13 +00:00 |
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natsukium
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c90607c5a7
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dssp: 4.4.2 -> 4.4.3
Diff: https://github.com/PDB-REDO/dssp/compare/refs/tags/v4.4.2...v4.4.3
Changelog: https://github.com/PDB-REDO/libcifpp/releases/tag/refs/tags/v4.4.3
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2023-09-28 15:38:55 +09:00 |
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R. Ryantm
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90361534b7
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stacks: 2.62 -> 2.65
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2023-09-26 03:03:04 +00:00 |
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github-actions[bot]
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3e52e5929d
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Merge master into staging-next
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2023-09-25 12:01:02 +00:00 |
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Mario Rodas
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b289d79b8d
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hmmer: add changelog to meta
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2023-09-24 04:24:00 +00:00 |
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R. Ryantm
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272a0e1edb
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hmmer: 3.3.2 -> 3.4
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2023-09-24 04:23:47 +00:00 |
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R. Ryantm
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d660b340ee
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neuron-mpi: 8.2.2 -> 8.2.3
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2023-09-23 02:33:53 +00:00 |
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github-actions[bot]
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583877beb2
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Merge master into staging-next
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2023-09-22 18:01:00 +00:00 |
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László Kupcsik
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c678bba28c
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trimmomatic: init at 0.39
Co-authored-by: Anderson Torres <torres.anderson.85@protonmail.com>
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2023-09-22 13:50:18 -03:00 |
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github-actions[bot]
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3245a21e71
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Merge master into staging-next
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2023-09-19 06:01:00 +00:00 |
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R. Ryantm
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65033fea28
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mosdepth: 0.3.4 -> 0.3.5
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2023-09-19 00:55:31 +00:00 |
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github-actions[bot]
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9fd6a65a3a
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Merge master into staging-next
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2023-09-18 12:01:07 +00:00 |
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R. Ryantm
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e567f85a64
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blast: 2.14.0 -> 2.14.1
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2023-09-16 03:10:11 +00:00 |
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Alyssa Ross
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4a027948f9
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Merge remote-tracking branch 'origin/staging-next' into staging
Conflicts:
pkgs/applications/radio/soapysdr/default.nix
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2023-09-14 11:31:01 +00:00 |
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Mario Rodas
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48780fa239
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Merge pull request #250309 from trofi/angsd-fix-parallel
angsd: pull patch pending upstream inclusion for parallel build fix
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2023-09-13 06:24:00 -05:00 |
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github-actions[bot]
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564dc31f47
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Merge staging-next into staging
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2023-09-12 18:01:30 +00:00 |
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R. Ryantm
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d5e6e8ac03
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veryfasttree: 4.0.2 -> 4.0.3
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2023-09-12 06:13:28 +00:00 |
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github-actions[bot]
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6d1f33a3ed
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Merge staging-next into staging
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2023-09-09 12:01:22 +00:00 |
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R. Ryantm
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ac77a8f7d0
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igv: 2.16.1 -> 2.16.2
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2023-09-09 05:56:58 +00:00 |
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Sandro Jäckel
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fccf04b620
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treewide: replace -DCMAKE_BUILD_TYPE in cmakeFlags with cmakeBuildType
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2023-09-08 14:18:26 +00:00 |
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