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34358 Commits

Author SHA1 Message Date
Thomas Tuegel
9d35918f1a
kdeWrapper: reformat propagated-user-env-packages 2017-01-10 10:06:03 -06:00
Vladimír Čunát
ee2edd4527
Merge branch 'master' into staging 2017-01-10 15:38:07 +01:00
Jörg Thalheim
3aca77a7f2
universal-ctags: 2016-12-17 -> 2017-01-08 2017-01-10 11:38:52 +01:00
Graham Christensen
1f700e6a9a Merge pull request #21773 from yurrriq/update/pkgs/development/tools/jid 
jid: 0.6.1 -> 0.7.1
 2017-01-09 21:25:40 -05:00
Thomas Tuegel
127b2fc7d8 Merge pull request #21771 from abbradar/kde-wrapper 
kdeWrapper: postpone /share linking till final buildEnv
 2017-01-09 20:23:01 -06:00
Graham Christensen
f17decf096 Merge pull request #21767 from ryantm/bundler 
bundler: 1.13.6 -> 1.13.7
 2017-01-09 21:19:31 -05:00
Eric Bailey
ae7511013b
jid: 0.6.1 -> 0.7.1 2017-01-09 18:41:53 -06:00
Daiderd Jordan
bba12a6c90
Merge branch 'master' into staging 2017-01-09 23:57:47 +01:00
Nikolay Amiantov
41b69a09b6 spidermonkey_{31,38}: fix sed problem with build 2017-01-10 01:30:11 +03:00
Nikolay Amiantov
8422cef099 kdeWrapper: postpone /share linking till final buildEnv 2017-01-10 01:07:21 +03:00
Pascal Wittmann
655db9b266
ceptre: 2016-01-01 -> 2016-11-27 2017-01-09 21:36:36 +01:00
Pascal Wittmann
a724f66b98
lirc: 0.9.3 -> 0.9.4 2017-01-09 21:31:05 +01:00
Daiderd Jordan
ab0bb24973
Revert "cairo: Add ApplicationServices as propagatedBuildInput" 
This reverts commit 0f67005c4a.
 2017-01-09 20:58:27 +01:00
Pascal Wittmann
fc56c8c5cd
global: 6.5.5 -> 6.5.6 2017-01-09 20:49:02 +01:00
Ryan Mulligan
605ec66342 bundler: 1.13.6 -> 1.13.7 2017-01-09 10:13:38 -08:00
Domen Kožar
464c79ea9f
turtle_1_3_0: fix build 2017-01-09 18:19:25 +01:00
Michael Raskin
5b4906ab49 nim: 0.15.2 -> 0.16.0 2017-01-09 13:06:14 +01:00
Michael Raskin
39ed261c4c Merge pull request #21632 from veprbl/sherpa_fix 
sherpa: fix sqlite dependency
 2017-01-09 09:58:22 +00:00
Michael Raskin
e2b30dc0f9 Merge pull request #21635 from peterhoeg/p/tora 
tora: init at 3.1
 2017-01-09 09:49:00 +00:00
Michael Raskin
b806408452 Merge pull request #21724 from ivan-tkatchev/pullrequest 
gtest, gmock: fix broken package by updating to 1.8.0.
 2017-01-09 09:31:17 +00:00
Michael Raskin
9b00d43ed5 Merge pull request #21750 from knedlsepp/fix-grib-problems 
grib-api: 1.14.4 -> 1.19.0
 2017-01-09 09:28:07 +00:00
Michael Raskin
370d94c243 Merge pull request #21758 from dtzWill/update/elfutils 
elfutils: 0.165 -> 0.168
 2017-01-09 09:26:28 +00:00
Dmitry Kalinkin
f7173a9187
fastnlo: fix yoda interface 2017-01-09 02:24:27 -05:00
Dmitry Kalinkin
bbc3082ebd
mcgrid: pkgconfig is the only way to locate mcgrid 2017-01-08 21:16:52 -05:00
Peter Hoeg
2190a84812 tora: init at 3.1 2017-01-09 09:26:46 +08:00
Jörg Thalheim
bcf8d8c6ef Merge pull request #21634 from peterhoeg/f/qscint 
qscintilla: 2.9 -> 2.9.4 and support for qt5
 2017-01-08 23:43:24 +01:00
Jörg Thalheim
90ea0c000c
octave: 4.0.3 -> 4.2.0 2017-01-08 23:40:40 +01:00
Will Dietz
2afcf34281 elfutils: Update website and URL to new sourceware location. 2017-01-08 16:30:05 -06:00
Will Dietz
157b216852 elfutils: 0.165 -> 0.168 2017-01-08 16:07:43 -06:00
Peter Simons
6d58ab2edf jailbreak-cabal: ghc-HEAD needs version 1.3.2 due to API changes in Cabal 
https://github.com/peti/jailbreak-cabal/issues/12
 2017-01-08 21:11:18 +01:00
Peter Simons
dd0d71727a git-annex: fix build 2017-01-08 21:11:18 +01:00
Peter Simons
667c4e4925 hackage-packages.nix: automatic Haskell package set update 
This update was generated by hackage2nix v2.0.4-7-g48fad11 from Hackage revision
47c259fc33.
 2017-01-08 21:11:17 +01:00
Peter Simons
9729a8d015 haskell-esqueleto: keep version 2.4.x around so that we can still build git-annex 2017-01-08 21:11:17 +01:00
Sebastian Hagen
d042abef26 zlib: Fix zlib.net URL. (#21753) 
Look for primary source file below
  http://zlib.net/fossils/ as opposed to
  http://zlib.net/
. zlib-1.2.8.tar.gz is still available at the former location, and will likely
remain there. In addition, it's important that the first URL work since zlib
is in the bootstrap path, and 16.09 (at least) bootstrap doesn't try to fetch
from later ones.
 2017-01-08 18:09:57 +01:00
Moritz Ulrich
7435fefd26
rustc: Disable fragile tcp tests on Darwin 
This is an alternative implementation of
https://github.com/NixOS/nixpkgs/pull/21741/files
 2017-01-08 16:55:36 +01:00
Graham Christensen
07e425b9b9 Merge pull request #21749 from sifmelcara/update/crystal 
crystal: 0.20.3 -> 0.20.4
 2017-01-08 08:49:59 -05:00
Domen Kožar
8940c68c09
hydra: 2016-04-15 -> 2016-12-09 
Fixes #19396 #21424
 2017-01-08 14:40:12 +01:00
Vladimír Čunát
abcd344ccb
perl-Compress-Raw-Zlib: try without testing for now 
Tests got broken by zlib update.  Also 2.0.65 -> 2.0.71,
but the update didn't help with this unfortunately.
 2017-01-08 14:31:55 +01:00
Vladimír Čunát
309c63c542
Merge branch 'master' into staging 2017-01-08 14:27:01 +01:00
Josef Kemetmueller
64e4b7ac42 grib-api: 1.14.4 -> 1.19.0 
- Remove downloading of testdata during buildPhase to
  - fix hydra build
  - remove impurity
  - reduce traffic
- Bump version
- Add myself as a maintainer
 2017-01-08 12:42:25 +01:00
Jay Mundrawala
3dc8b5d904 rustUnstableBin.rustc: Run patchelf on bin/rustdoc (#21746) 
Cargo seems to run rustdoc and produces an annoying error when
it tries to run.
 2017-01-08 10:53:44 +01:00
mingchuan
e8c9a4b3ba crystal: 0.20.3 -> 0.20.4 2017-01-08 14:31:59 +08:00
Daiderd Jordan
826d6aa6cd Merge pull request #21382 from johbo/darwin-pygtk-quartz-backend 
Darwin gtk2/pygtk quartz backend
 2017-01-08 00:18:33 +01:00
tkatchev
9c2a222092 gtest, gmock: fix broken package by updating to 1.8.0. 2017-01-08 00:00:55 +03:00
Domen Kožar
372e04f189
libpqxx: use gnused_422 2017-01-07 20:16:17 +01:00
Matthew Bauer
ea053cad7a gtk-mac-integration: init at 2.0.8 2017-01-07 19:21:42 +01:00
Johannes Bornhold
0f67005c4a cairo: Add ApplicationServices as propagatedBuildInput 
Noticed that it caused depending packages to fail, like librsvg, imagemagiv, graphviz.
 2017-01-07 19:21:42 +01:00
schneefux
96504cd75c pythonPackages.discordpy: 0.15.1 -> 0.16 2017-01-07 20:02:05 +02:00
Anmol Sethi
2ef6af7afd libtermkey: from 0.18 to 0.19 2017-01-07 19:59:45 +02:00
Johannes Bornhold
8f7adffe4d pygtk: Add flag -ObjC for darwin 
Had to add this so that it was able to parse the headers from the frameworks.
 2017-01-07 17:35:09 +01:00
Johannes Bornhold
5a572f8018 gtk2: Use quartz backend on darwin 2017-01-07 17:35:09 +01:00
Johannes Bornhold
9f31633a50 librsvg: Add framework ApplicationServices for darwin 2017-01-07 17:31:10 +01:00
Johannes Bornhold
354c91df2e pango: Add darwin frameworks for fond rendering 2017-01-07 17:31:10 +01:00
Johannes Bornhold
bbdca635cf cairo: Add CoreText for darwin 
This helps so that fonts are properly rendered in gtk when used with the backend
"quartz".
 2017-01-07 17:31:10 +01:00
Shea Levy
71fc7f9748 ghc-head: Fixes for new base and Cabal 2017-01-07 10:28:48 -05:00
Domen Kožar
133ba5f08a
GHC: 8.0.2-rc2 -> 8.0.2 2017-01-07 16:17:54 +01:00
Gabriel Ebner
da9e9061f1 haskellPackages.hledger-diff: 0.2.0.6 -> 0.2.0.7 
Currently hledger-diff is broken because of the hledger-lib version
bump.
 2017-01-07 15:16:36 +01:00
Peter Hoeg
427de85390 loki: init at 0.1.7 2017-01-07 20:49:54 +08:00
Graham Christensen
428927ffa6
openjpeg2: patch for multiple CVEs 
-  Floating Point Exception (aka FPE or divide by zero) in
    opj_pi_next_cprl function in openjp2/pi.c:523 in OpenJPEG
    2.1.2. (CVE-2016-9112)

 -  There is a NULL Pointer Access in function imagetopnm of
    convert.c:1943(jp2) of OpenJPEG 2.1.2. image->comps[compno].data is
    not assigned a value after initialization(NULL). Impact is Denial of
    Service. (CVE-2016-9114)

 -  NULL Pointer Access in function imagetopnm of convert.c:2226(jp2) in
    OpenJPEG 2.1.2. Impact is Denial of Service. Someone must open a
    crafted j2k file. (CVE-2016-9116)

 -  Heap Buffer Overflow (WRITE of size 4) in function pnmtoimage of
    convert.c:1719 in OpenJPEG 2.1.2. (CVE-2016-9118)
 2017-01-07 06:51:31 -05:00
Peter Simons
c5f8c7fe36 Merge pull request #21722 from mimadrid/fix/r-modules 
Fix a lot of rPackages
 2017-01-07 12:19:42 +01:00
Dmitry Kalinkin
44a78fb0da
rivet: fix runtime on darwin 2017-01-07 03:00:04 -05:00
Shea Levy
845dd121f8 ghc-head: Put ./boot into commonPreConfigure 2017-01-06 22:10:29 -05:00
Shea Levy
c5c7911ac2 libuv: disable getaddrinfo tests. 
Seem to require network access, at least on darwin
 2017-01-06 21:09:49 -05:00
Franz Pletz
887e703d42 Merge pull request #21640 from mguentner/cpp_ipfs_api_update 
cpp-ipfs-api: 2016-11-09 -> 2017-01-04
 2017-01-07 00:44:01 +01:00
Vladimír Čunát
030065f6bd
libpng: 1.6.27 -> 1.6.28 2017-01-06 22:46:25 +01:00
Thomas Tuegel
8633dab72a Merge pull request #21650 from dbalan/ldns-1.7.0 
ldns 1.6.17 -> 1.7.0
 2017-01-06 14:46:18 -06:00
Vladimír Čunát
948e9edce6
zlib: maintenance 1.2.8 -> 1.2.10 
The removed CVEs should be fixed in the release.
 2017-01-06 21:45:20 +01:00
Vladimír Čunát
5ab9e23561
gtk3: maintenance 3.22.5 -> 3.22.6 2017-01-06 21:36:21 +01:00
Vladimír Čunát
9a9912a3e4
harfbuzz: 1.3.4 -> 1.4.1 2017-01-06 21:35:56 +01:00
Vladimír Čunát
1e253d54f5
libpng12: security 1.2.56 -> 1.2.57 
CVE-2016-10087
 2017-01-06 21:15:46 +01:00
Vladimír Čunát
7bdf2a4498
gdk-pixbuf: maintenance 2.36.2 -> 2.36.3 2017-01-06 21:08:33 +01:00
mimadrid
8954412fcc
r-modules: fix snpStats package 2017-01-06 21:07:25 +01:00
mimadrid
b5a0925663
r-modules: fix VariantAnnotation package 2017-01-06 21:07:25 +01:00
mimadrid
6540b6507d
r-modules: fix rtracklayer package 2017-01-06 21:07:25 +01:00
mimadrid
baf65d5000
r-modules: fix Rsubread package 2017-01-06 21:07:25 +01:00
mimadrid
9ebab25442
r-modules: fix gmapR package 2017-01-06 21:07:25 +01:00
mimadrid
286e86f3a5
r-modules: fix oligo package 2017-01-06 21:07:25 +01:00
mimadrid
afd1a4c933
r-modules: fix affyio package 2017-01-06 21:07:25 +01:00
mimadrid
4c0c3c7493
r-modules: fix BitSeq package 2017-01-06 21:07:24 +01:00
mimadrid
272b447ea7
r-modules: fix bamsignals package 2017-01-06 21:07:24 +01:00
mimadrid
c5e4754ca7
r-modules: fix affyPLM package 2017-01-06 21:07:24 +01:00
mimadrid
1d7fd8f3c4
r-modules: fix xml2 package 2017-01-06 21:07:24 +01:00
mimadrid
5b813c2ab0
r-modules: fix XBRL package 2017-01-06 21:07:24 +01:00
mimadrid
512be9e14a
r-modules: fix WhopGenome package 2017-01-06 21:07:24 +01:00
mimadrid
f9d84f8b65
r-modules: fix tkrplot package 2017-01-06 21:07:24 +01:00
mimadrid
0b3e62bb12
r-modules: fix tiff package 2017-01-06 21:07:23 +01:00
mimadrid
9420fa23c6
r-modules: fix TAQMNGR package 2017-01-06 21:07:23 +01:00
mimadrid
2303e63116
r-modules: fix spate package 2017-01-06 21:07:23 +01:00
mimadrid
fcbed4b654
r-modules: fix showtext package 2017-01-06 21:07:23 +01:00
mimadrid
8a6b58d51d
r-modules: fix seqminer package 2017-01-06 21:07:23 +01:00
mimadrid
e1a5eeef06
r-modules: fix seqinr package 2017-01-06 21:07:22 +01:00
mimadrid
1ef67b9e78
r-modules: fix RVowpalWabbit package 2017-01-06 21:05:54 +01:00
mimadrid
ae2723a144
r-modules: fix rtiff package 2017-01-06 21:05:54 +01:00
mimadrid
d7ac90dd0c
r-modules: fix rtfbs package 2017-01-06 21:05:53 +01:00
mimadrid
fd175e4084
r-modules: fix Rssa package 2017-01-06 21:05:52 +01:00
mimadrid
bd2aaada6e
r-modules: fix RSclient package 2017-01-06 21:05:52 +01:00
mimadrid
53235dbe14
r-modules: fix rphast package 2017-01-06 21:05:52 +01:00
mimadrid
780fb79e32
r-modules: fix Rmpfr package 2017-01-06 21:05:51 +01:00
mimadrid
a58db75ccb
r-modules: fix rmatio package 2017-01-06 21:05:51 +01:00
mimadrid
674a2077dd
r-modules: fix rJava package 2017-01-06 21:05:51 +01:00