Commit Graph

42 Commits

Author SHA1 Message Date
Fabian Affolter
7d3c53e6d1 snakemake: rename GitPython 2022-12-05 21:53:53 +01:00
R. Ryantm
f28b6e5468 snakemake: 7.14.1 -> 7.14.2 2022-09-27 19:16:23 -04:00
R. Ryantm
fe2504c61b snakemake: 7.14.0 -> 7.14.1 2022-09-26 23:13:22 -04:00
R. Ryantm
914100fd45 snakemake: 7.12.1 -> 7.14.0 2022-09-08 09:57:07 -04:00
R. Ryantm
7f3ad42166 snakemake: 7.12.0 -> 7.12.1 2022-08-13 16:16:11 -04:00
R. Ryantm
4c3caca96d snakemake: 7.9.0 -> 7.12.0 2022-07-31 11:06:29 -04:00
R. Ryantm
7a5b52ff26 snakemake: 7.8.5 -> 7.9.0 2022-07-21 15:24:14 +00:00
R. RyanTM
200d8c500a
snakemake: 7.8.3 -> 7.8.5 (#179874) 2022-07-04 12:24:26 -04:00
R. Ryantm
671aeb2769 snakemake: 7.8.2 -> 7.8.3 2022-06-21 19:01:53 +00:00
R. Ryantm
acf23020f0 snakemake: 7.8.1 -> 7.8.2 2022-06-09 19:49:56 +00:00
R. Ryantm
e9fb739e59 snakemake: 7.8.0 -> 7.8.1 2022-06-02 01:20:40 +00:00
R. RyanTM
7a54d237e0
snakemake: 7.7.0 -> 7.8.0 (#174592) 2022-05-30 10:51:36 -04:00
R. Ryantm
a52b64015a snakemake: 7.6.2 -> 7.7.0 2022-05-17 16:18:18 +00:00
R. Ryantm
5b55f851ac snakemake: 7.6.1 -> 7.6.2 2022-05-07 16:16:09 +00:00
R. Ryantm
166b1378fe snakemake: 7.5.0 -> 7.6.1 2022-05-04 16:06:44 +00:00
Fabian Affolter
8b176291d7 snakemake: 6.15.5 -> 7.5.0 2022-05-01 13:02:10 +02:00
Daniel Wheeler
4befe7a89f
snakemake: 6.10.0 -> 6.15.5 (#159026)
Fetch from GitHub rather than PyPI so tests are included.
2022-02-17 18:06:23 -05:00
Dmitry Kalinkin
49d19b7945
snakemake: 6.7.0 -> 6.10.0 2021-10-24 17:49:14 -04:00
Dmitry Kalinkin
b8c5c06aab
snakemake: 6.6.1 -> 6.7.0 2021-08-28 02:18:38 -04:00
Sandro Jäckel
b4099137b1
pythonPackages: deprecate ConfigArgParse alias 2021-07-21 13:32:54 +02:00
Dmitry Kalinkin
3a79b1fece
snakemake: 6.5.3 -> 6.6.1 2021-07-19 16:22:36 -04:00
Dmitry Kalinkin
a93f2af20b
snakemake: add missing optional dependenices
These are needed to generate reports
2021-07-19 16:19:27 -04:00
Dmitry Kalinkin
45bed6d99f
snakemake: 6.5.0 -> 6.5.3 2021-07-11 10:40:09 -04:00
Dmitry Kalinkin
e3678ae8a6
snakemake: 6.0.5 -> 6.5.0 2021-06-24 11:36:26 -04:00
Sandro Jäckel
d6ff646b3f pythonPackages.smart_open: rename to smart-open 2021-05-22 15:02:50 -07:00
Dmitry Kalinkin
8887f4655e
snakemake: 5.28.0 -> 6.0.5 2021-03-26 18:32:26 -04:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
Profpatsch
4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Dmitry Kalinkin
68e06c19d6
snakemake: 5.19.3 -> 5.28.0 2020-11-17 17:37:35 -05:00
Dmitry Kalinkin
eb121e0901
snakemake: 5.17.0 -> 5.19.3 2020-07-02 23:36:20 -04:00
R. RyanTM
c1b7c7e87c
snakemake: 5.16.0 -> 5.17.0 (#88766) 2020-05-24 13:32:14 -04:00
R. RyanTM
92d970c766
snakemake: 5.15.0 -> 5.16.0 (#87496) 2020-05-10 10:09:53 -04:00
Renato Garcia
22133c6bf3
snakemake: 5.13.0 -> 5.15.0 (#85913) 2020-04-25 09:19:54 -04:00
Konrad Borowski
f527f9db3a snakemake: update homepage link to use HTTPS 2020-04-24 19:44:59 -07:00
R. RyanTM
cff5adc2fb
snakemake: 5.10.0 -> 5.13.0 (#83839) 2020-03-31 00:39:00 -04:00
Dmitry Kalinkin
68db99ad97 snakemake: 5.9.1 -> 5.10.0 2020-03-14 15:58:24 -07:00
R. RyanTM
a94c66bc88 snakemake: 5.8.1 -> 5.9.1 2020-01-30 09:44:26 +00:00
R. RyanTM
13c757e69c snakemake: 5.7.4 -> 5.8.1 (#74637) 2019-12-09 20:47:24 +01:00
Dmitry Kalinkin
93ee8095b0 snakemake: 5.4.4 -> 5.7.4 (#72929)
(#72929)
2019-11-13 00:46:56 +01:00
Dmitry Kalinkin
c321b64b3f
snakemake: 5.2.2 -> 5.4.4 2019-04-10 14:18:26 -04:00
Renato Garcia
318c9296fa snakemake: add maintainers (#46117) 2018-09-05 21:46:17 +02:00
Sebastian Meric de Bellefon
93ce77af40 python.pkgs.snakemake: init at 5.2.2 2018-09-01 09:18:19 -04:00