diff --git a/pkgs/applications/science/biology/ants/default.nix b/pkgs/applications/science/biology/ants/default.nix index 834d2497e8df..6e1a2a3407ee 100644 --- a/pkgs/applications/science/biology/ants/default.nix +++ b/pkgs/applications/science/biology/ants/default.nix @@ -1,9 +1,8 @@ -{ stdenv, fetchFromGitHub, fetchpatch, cmake, makeWrapper, itk, vtk }: +{ stdenv, fetchFromGitHub, fetchpatch, cmake, makeWrapper, itk4, vtk }: stdenv.mkDerivation rec { - _name = "ANTs"; - _version = "2.2.0"; - name = "${_name}-${_version}"; + pname = "ANTs"; + version = "2.2.0"; src = fetchFromGitHub { owner = "ANTsX"; @@ -21,7 +20,7 @@ stdenv.mkDerivation rec { ]; nativeBuildInputs = [ cmake makeWrapper ]; - buildInputs = [ itk vtk ]; + buildInputs = [ itk4 vtk ]; cmakeFlags = [ "-DANTS_SUPERBUILD=FALSE" "-DUSE_VTK=TRUE" ]; @@ -34,7 +33,7 @@ stdenv.mkDerivation rec { ''; meta = with stdenv.lib; { - homepage = https://github.com/ANTxS/ANTs; + homepage = https://github.com/ANTsX/ANTs; description = "Advanced normalization toolkit for medical image registration and other processing"; maintainers = with maintainers; [ bcdarwin ]; platforms = platforms.unix; diff --git a/pkgs/development/libraries/itk/4.x.nix b/pkgs/development/libraries/itk/4.x.nix new file mode 100644 index 000000000000..df016d9fcac0 --- /dev/null +++ b/pkgs/development/libraries/itk/4.x.nix @@ -0,0 +1,34 @@ +{ stdenv, fetchurl, cmake, libX11, libuuid, xz, vtk }: + +stdenv.mkDerivation rec { + name = "itk-4.13.1"; + + src = fetchurl { + url = mirror://sourceforge/itk/InsightToolkit-4.13.1.tar.xz; + sha256 = "0p4cspgbnjsnkjz8nfg092yaxz8qkqi2nkxjdv421d0zrmi0i2al"; + }; + + cmakeFlags = [ + "-DBUILD_TESTING=OFF" + "-DBUILD_EXAMPLES=OFF" + "-DBUILD_SHARED_LIBS=ON" + "-DModule_ITKMINC=ON" + "-DModule_ITKIOMINC=ON" + "-DModule_ITKIOTransformMINC=ON" + "-DModule_ITKVtkGlue=ON" + "-DModule_ITKReview=ON" + ]; + + enableParallelBuilding = true; + + nativeBuildInputs = [ cmake xz ]; + buildInputs = [ libX11 libuuid vtk ]; + + meta = { + description = "Insight Segmentation and Registration Toolkit"; + homepage = http://www.itk.org/; + license = stdenv.lib.licenses.asl20; + maintainers = with stdenv.lib.maintainers; [viric]; + platforms = with stdenv.lib.platforms; linux ++ darwin; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 406b42f498de..a315698ccd95 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -11412,6 +11412,8 @@ in isso = callPackage ../servers/isso { }; + itk4 = callPackage ../development/libraries/itk/4.x.nix { }; + itk = callPackage ../development/libraries/itk { }; jasper = callPackage ../development/libraries/jasper { };