Update based on comments to pull request
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0dab509b3c
commit
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@ -1,26 +0,0 @@
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{ stdenv, fetchurl, cmake,
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singlePrec ? true,
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fftw
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}:
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let meta = import ./meta.nix;
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in
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stdenv.mkDerivation {
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name = "gromacs-4.5.5";
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src = fetchurl {
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url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-4.5.5.tar.gz";
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md5 = "6a87e7cdfb25d81afa9fea073eb28468";
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};
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buildInputs = [cmake fftw];
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cmakeFlags = ''
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${if singlePrec then "-DGMX_DOUBLE=OFF" else "-DGMX_DOUBLE=ON -DGMX_DEFAULT_SUFFIX=OFF"}
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'';
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inherit meta;
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}
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@ -1,2 +1,49 @@
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import ./4.5.5.nix
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{ stdenv, fetchurl, cmake,
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singlePrec ? true,
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fftw
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}:
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let meta = import ./meta.nix;
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in
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stdenv.mkDerivation {
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name = "gromacs-4.5.5";
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src = fetchurl {
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url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-4.5.5.tar.gz";
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md5 = "6a87e7cdfb25d81afa9fea073eb28468";
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};
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buildInputs = [cmake fftw];
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cmakeFlags = ''
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${if singlePrec then "-DGMX_DOUBLE=OFF" else "-DGMX_DOUBLE=ON -DGMX_DEFAULT_SUFFIX=OFF"}
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'';
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meta = {
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homepage = "http://www.gromacs.org";
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licence = "GPLv2";
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description = "The GROMACS molecular dynamics software package";
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longDescription = ''
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GROMACS is a versatile package to perform molecular dynamics,
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i.e. simulate the Newtonian equations of motion for systems
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with hundreds to millions of particles.
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It is primarily designed for biochemical molecules like
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proteins, lipids and nucleic acids that have a lot of
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complicated bonded interactions, but since GROMACS is
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extremely fast at calculating the nonbonded interactions (that
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usually dominate simulations) many groups are also using it
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for research on non-biological systems, e.g. polymers.
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GROMACS supports all the usual algorithms you expect from a
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modern molecular dynamics implementation, (check the online
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reference or manual for details), but there are also quite a
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few features that make it stand out from the competition.
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See: http://www.gromacs.org/About_Gromacs for details.
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'';
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};
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}
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@ -1,27 +0,0 @@
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meta = {
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homepage = "www.gromacs.org";
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licence = "GPLv2";
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description = "The GROMACS molecular dynamics software package";
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longDescription = ''
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GROMACS is a versatile package to perform molecular dynamics,
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i.e. simulate the Newtonian equations of motion for systems
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with hundreds to millions of particles.
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It is primarily designed for biochemical molecules like
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proteins, lipids and nucleic acids that have a lot of
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complicated bonded interactions, but since GROMACS is
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extremely fast at calculating the nonbonded interactions (that
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usually dominate simulations) many groups are also using it
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for research on non-biological systems, e.g. polymers.
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GROMACS supports all the usual algorithms you expect from a
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modern molecular dynamics implementation, (check the online
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reference or manual for details), but there are also quite a
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few features that make it stand out from the competition.
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See: www.gromacs.org/About_Gromacs
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'';
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};
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@ -8668,11 +8668,11 @@ let
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cmake = cmakeCurses;
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};
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gromacsDouble = callPackage ../applications/science/molecular-dynamics/gromacs {
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gromacsDouble = lowPrio (callPackage ../applications/science/molecular-dynamics/gromacs {
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singlePrec = false;
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fftw = fftw;
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cmake = cmakeCurses;
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};
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});
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### SCIENCE/LOGIC
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