htslib: fix up
This commit is contained in:
parent
bebccf176e
commit
0acf94bb9f
@ -2,16 +2,16 @@
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
name = "${pname}-${version}";
|
||||
version = "${major}.0";
|
||||
pname = "htslib";
|
||||
major = "1.6";
|
||||
version = "1.6";
|
||||
|
||||
src = fetchurl {
|
||||
url = "https://github.com/samtools/htslib/releases/download/${major}/htslib-${major}.tar.bz2";
|
||||
url = "https://github.com/samtools/htslib/releases/download/${version}/${name}.tar.bz2";
|
||||
sha256 = "1jsca3hg4rbr6iqq6imkj4lsvgl8g9768bcmny3hlff2w25vx24m";
|
||||
};
|
||||
|
||||
propagatedNativeBuildInputs = [ perl ];
|
||||
# perl is only used during the check phase.
|
||||
nativeBuildInputs = [ perl ];
|
||||
|
||||
buildInputs = [ zlib bzip2 lzma curl ];
|
||||
|
||||
@ -19,14 +19,14 @@ stdenv.mkDerivation rec {
|
||||
|
||||
installFlags = "prefix=$(out)";
|
||||
|
||||
preCheck = ''
|
||||
patchShebangs test/
|
||||
'';
|
||||
|
||||
enableParallelBuilding = true;
|
||||
|
||||
doCheck = true;
|
||||
|
||||
preCheck = ''
|
||||
find test -name "*.pl" -exec sed -ie 's|/usr/bin/\(env[[:space:]]\)\{0,1\}perl|${perl}/bin/perl|' {} +
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
description = "A C library for reading/writing high-throughput sequencing data";
|
||||
license = licenses.mit;
|
||||
@ -35,4 +35,3 @@ stdenv.mkDerivation rec {
|
||||
maintainers = [ maintainers.mimadrid ];
|
||||
};
|
||||
}
|
||||
|
||||
|
Loading…
Reference in New Issue
Block a user